Augustus [job submission]

Paste your sequence(s) here help

or upload a file in (multiple) FASTA format

or fill in an example.

Organism: Aedes aegypti Amphimedon queenslandica Ancylostoma ceylanicum Apis dorsata Apis mellifera Acyrthosiphon pisum Bombus terrestris Brugia malayi Caenorhabditis elegans Callorhinchus milii Camponotus floridanus Ciona intestinalis Culex pipiens Danio rerio Drosophila melanogaster Gallus gallus Heliconius melpomene Homo sapiens Lethenteron japonicum Mnemiopsis leidyi Nasonia vitripennis Nematostella vectensis Parasteatoda tepidariorum Petromyzon marinus Pisaster ochraceus Rhodnius prolixus Schistosoma mansoni Strongylocentrotus purpuratus Tribolium castaneum Trichinella spiralis Xipophorus maculatus Tetrahymena thermophila Toxoplasma gondii Arabidopsis thaliana Chlamydomonas reinhardtii Galdieria sulphuraria Nicotiana attenuata Oryza brachyantha Solanum lycopersicum Theobroma cacao Triticum aestivum Volvox carteri Zea mays Aspergillus fumigatus Aspergillus nidulans Aspergillus oryzae Aspergillus terreus Botrytis cinerea Candida albicans Candida guilliermondii Candida tropicalis Chaetomium globosum Coccidioides immitis Conidiobolus coronatus Coprinus cinereus Cryptococcus neoformans Debaryomyces hansenii Encephalitozoon cuniculi Eremothecium gossypii Fusarium graminearum Histoplasma capsulatum Kluyveromyces lactis Laccaria bicolor Lodderomyces elongisporus Magnaporthe grisea Neurospora crassa Phanerochaete chrysosporium Pichia stipitis Rhizopus oryzae Saccharomyces cerevisiae Schizosaccharomyces pombe Ustilago maydis Verticillium longisporum Yarrowia lipolytica Escherichia coli Staphylococcus aureus Thermoanaerobacter tengcongensis Sulfolobus solfataricus

Report genes on: both strands forward strand only reverse strand only

Alternative transcripts: none few middle many

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expert options

Upload cDNA (ESTs, mRNAs) sequences. Non-commercial users only. help

or upload a cDNA sequence file (FASTA).

or fill in an example.

Paste here constraints that anchor the prediction help

or upload a constraints file (format described here).

or fill in an example.

allowed gene structure help

predict any number of (possibly partial) genes
only predict complete genes
only predict complete genes - at least one
predict exactly one gene

 ignore conflicts with other strand