# AUGUSTUS gene predictions for Chlorella NC64A
# Mario Stanke, May 1st, 2009
Assembly taken from ftp://ftp.jgi-psf.org/pub/JGI_data/Chlorella_NC64A/assembly/v1.0/Chlorella_NC64A.allmasked.gz
EST set taken from ftp://ftp.jgi-psf.org/pub/JGI_data/Chlorella_NC64A/ESTs/v1.0/Chlorella_NC64A_ESTs.fasta.gz

The predictions incorporate the EST evidence where available.

10667 genes with
10924 transcripts


You might want to to do a
grep -P "\t(CDS|exon)\t" augustus.gtf > augustus.filtered.gtf
do filter out the relevant lines and to make it compatible with downstream programs.