This folder contains gene predictions of AUGUSTUS on Caenorhabditis species

- C.brenneri
- C.briggsae
- C.elegans
- C.remanei

The predictions were performed on masked sequence using evidence from
ESTs (through BLAT) and proteins (through AGRIPPA).
The parameters had been estimated on the nGASP training set for C.elegans.


briggsae
--------
download chromosomes from
ftp://ftp.wormbase.org/pub/wormbase/genomes/briggsae/sequences/dna/briggsae_cb3.fa.gz


remanei
-------
download supercontigs from
http://genome.wustl.edu/pub/organism/Invertebrates/Caenorhabditis_remanei/assembly/Caenorhabditis_remanei-15.0.1/output/supercontigs.fa.gz


brenneri
--------
download supercontigs from
http://genome.wustl.edu/pub/organism/Invertebrates/Caenorhabditis_PB2801/assembly/Caenorhabditis_PB2801-4.0/output/supercontigs.fa.gz


elegans
-------
WS180 sequences downloaded from :
ftp://ftp.wormbase.org/pub/wormbase/genomes/elegans/sequences/dna/