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| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| aln2wig | 2011-03-02 14:21 | 31K | |
| wig2hints.pl | 2011-03-02 14:21 | 5.2K | |
| utrgff2gbrowse.pl | 2011-03-02 14:21 | 2.3K | |
| transMap2hints.pl | 2011-03-02 14:21 | 18K | |
| summarizeACGTcontent.pl | 2011-03-02 14:21 | 2.1K | |
| splitMfasta.pl | 2011-03-02 14:21 | 1.7K | |
| scipiogff2gff.pl | 2011-03-02 14:21 | 1.1K | |
| runAllSim4.pl | 2011-03-02 14:21 | 723 | |
| retroDB2hints.pl | 2011-03-02 14:21 | 1.9K | |
| ratewig.pl | 2011-03-02 14:21 | 584 | |
| randomSplit.pl | 2011-03-02 14:21 | 1.5K | |
| pslMap.pl | 2011-03-02 14:21 | 7.8K | |
| prints2prfl.pl | 2011-03-02 14:21 | 10K | |
| polyA2hints.pl | 2011-03-02 14:21 | 2.3K | |
| phastconsDB2hints.pl | 2011-03-02 14:21 | 2.7K | |
| pasapolyA2hints.pl | 2011-03-02 14:21 | 2.1K | |
| parseSim4Output.pl | 2011-03-02 14:21 | 3.5K | |
| optimize_augustus.pl | 2011-03-02 14:21 | 45K | |
| opt_init_and_term_probs.pl | 2011-03-02 14:20 | 6.9K | |
| new_species.pl | 2011-03-02 14:20 | 4.3K | |
| msa2prfl.pl | 2011-03-02 14:20 | 20K | |
| makeUtrTrainingSet.pl | 2011-03-02 14:20 | 16K | |
| makeMatchLists.pl | 2011-03-02 14:20 | 468 | |
| maf2conswig.pl | 2011-03-02 14:20 | 3.4K | |
| join_mult_hints.pl | 2011-03-02 14:20 | 1.2K | |
| join_aug_pred.pl | 2011-03-02 14:20 | 8.5K | |
| intron2exex.pl | 2011-03-02 14:20 | 4.4K | |
| helpMod.pm | 2011-03-02 14:20 | 8.0K | |
| gtf2gff.pl | 2011-03-02 14:20 | 12K | |
| gffGetmRNA.pl | 2011-03-02 14:20 | 4.0K | |
| gff2ps_mycustom | 2011-03-02 14:20 | 1.7K | |
| gff2gbSmallDNA.pl | 2011-03-02 14:20 | 16K | |
| getAnnoFasta.pl | 2011-03-02 14:20 | 6.5K | |
| gbrowse.conf | 2011-03-02 14:20 | 7.9K | |
| filterPSL.pl | 2011-03-02 14:20 | 16K | |
| filterGenes.pl | 2011-03-02 14:20 | 848 | |
| filter-ppx.pl | 2011-03-02 14:20 | 435 | |
| exoniphyDb2hints.pl | 2011-03-02 14:20 | 1.3K | |
| exonerate2hints.pl | 2011-03-02 14:20 | 3.0K | |
| del_from_prfl.pl | 2011-03-02 14:20 | 3.2K | |
| createAugustusJoblist.pl | 2011-03-02 14:20 | 4.8K | |
| clusterAndSplitGenes.pl | 2011-03-02 14:20 | 7.4K | |
| checkUTR | 2011-03-02 14:20 | 1.1K | |
| block2prfl.pl | 2011-03-02 14:20 | 11K | |
| blat2hints.pl | 2011-03-02 14:20 | 30K | |
| blat2gbrowse.pl | 2011-03-02 14:20 | 3.7K | |
| bedgraph2wig.pl | 2011-03-02 14:20 | 3.3K | |
| autoRun.pathInfo | 2011-03-02 14:20 | 195 | |
| autoAugTrain.pl | 2011-03-02 14:20 | 39K | |
| autoAugPred.pl | 2011-03-02 14:20 | 20K | |
| autoAug.pl | 2011-03-02 14:20 | 45K | |
| augustus2gbrowse.pl | 2011-03-02 14:20 | 389 | |
| augustus2browser.pl | 2011-03-02 14:20 | 3.0K | |
| SplicedAlignment.pm | 2011-03-02 14:20 | 12K | |
| README.autoAug | 2011-03-02 14:20 | 12K | |
| Makefile | 2011-03-02 14:20 | 68 | |
| compileSpliceCands/ | 2011-03-02 12:24 | - | |