Name                    Last modified       Size  Description

 Parent Directory        27-Jul-2010 18:22      -  
 Makefile                01-Nov-2009 14:43     1k  
 README.autoAug          01-Nov-2009 14:43    12k  
 aln2wig                 01-Nov-2009 14:43    20k  
 augustus2browser.pl     27-Jul-2010 18:25     3k  
 augustus2gbrowse.pl     27-Jul-2010 18:25     1k  
 autoAug.pl              27-Jul-2010 18:25    44k  
 autoAugPred.pl          27-Jul-2010 18:25    20k  
 autoAugTrain.pl         27-Jul-2010 18:25    39k  
 autoRun.pathInfo        01-Nov-2009 14:43     1k  
 bedgraph2wig.pl         27-Jul-2010 18:25     3k  
 blat2gbrowse.pl         27-Jul-2010 18:25     4k  
 blat2hints.pl           27-Jul-2010 18:25    30k  
 checkUTR                01-Nov-2009 14:43     1k  
 clusterAndSplitGenes.pl 27-Jul-2010 18:25     7k  
 createAugustusJoblis..> 27-Jul-2010 18:25     5k  
 exonerate2hints.pl      27-Jul-2010 18:25     3k  
 exoniphyDb2hints.pl     27-Jul-2010 18:25     1k  
 filterGenes.pl          27-Jul-2010 18:25     1k  
 filterPSL.pl            27-Jul-2010 18:25    16k  
 gbrowse.conf            01-Nov-2009 14:43     8k  
 getAnnoFasta.pl         27-Jul-2010 18:25     7k  
 gff2gbSmallDNA.pl       27-Jul-2010 18:25    16k  
 gff2ps_mycustom         01-Nov-2009 14:43     2k  
 gffGetmRNA.pl           27-Jul-2010 18:25     4k  
 gtf2gff.pl              27-Jul-2010 18:25    12k  
 helpMod.pm              01-Nov-2009 14:43     8k  
 intron2exex.pl          27-Jul-2010 18:25     4k  
 join_aug_pred.pl        27-Jul-2010 18:25     9k  
 join_mult_hints.pl      27-Jul-2010 18:25     1k  
 maf2conswig.pl          27-Jul-2010 18:25     3k  
 makeUtrTrainingSet.pl   27-Jul-2010 18:25    16k  
 new_species.pl          27-Jul-2010 18:25     4k  
 opt_init_and_term_pr..> 27-Jul-2010 18:25     7k  
 optimize_augustus.pl    27-Jul-2010 18:25    41k  
 pasapolyA2hints.pl      27-Jul-2010 18:25     2k  
 phastconsDB2hints.pl    27-Jul-2010 18:25     3k  
 polyA2hints.pl          27-Jul-2010 18:25     2k  
 pslMap.pl               27-Jul-2010 18:25     8k  
 randomSplit.pl          27-Jul-2010 18:25     1k  
 ratewig.pl              27-Jul-2010 18:25     1k  
 retroDB2hints.pl        27-Jul-2010 18:25     2k  
 scipiogff2gff.pl        27-Jul-2010 18:25     1k  
 splitMfasta.pl          27-Jul-2010 18:25     2k  
 summarizeACGTcontent.pl 27-Jul-2010 18:25     2k  
 transMap2hints.pl       27-Jul-2010 18:25    18k  
 utrgff2gbrowse.pl       27-Jul-2010 18:25     2k  
 wig2hints.pl            27-Jul-2010 18:25     5k